Cite us

This library has been detailed in a more general article spatial omics analysis, see the Sopa library. The latter article is not published yet, but you can cite our preprint:

@article {Blampey2023.12.22.571863,
    author = {Quentin Blampey & Kevin Mulder et al.},
    title = {Sopa: a technology-invariant pipeline for analyses of image-based spatial-omics},
    elocation-id = {2023.12.22.571863},
    year = {2023},
    doi = {10.1101/2023.12.22.571863},
    publisher = {Cold Spring Harbor Laboratory},
    URL = {https://www.biorxiv.org/content/early/2023/12/23/2023.12.22.571863},
    eprint = {https://www.biorxiv.org/content/early/2023/12/23/2023.12.22.571863.full.pdf},
    journal = {bioRxiv}
}

This library has been developed by Quentin Blampey, PhD student in Biomathematics / Deep Learning. The following institutions funded this work:

• Lab of Mathematics and Computer Science (MICS), CentraleSupélec (Engineering School, Paris-Saclay University).
• PRISM center, Gustave Roussy Institute (Cancer campus, Paris-Saclay University).