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Getting started

Installation

spatialdata_xenium_explorer can be installed on every OS with pip or poetry on python>=3.9.

Advice (optional)

We advise creating a new environment via a package manager (except if you use Poetry, which will automatically create the environment).

For instance, you can create a new conda environment:

conda create --name spatialdata_xenium_explorer python=3.10
conda activate spatialdata_xenium_explorer

Choose one of the following, depending on your needs (it should take at most a few minutes):

pip install spatialdata_xenium_explorer

git clone https://github.com/quentinblampey/spatialdata_xenium_explorer.git
cd spatialdata_xenium_explorer

pip install -e .

git clone https://github.com/quentinblampey/spatialdata_xenium_explorer.git
cd spatialdata_xenium_explorer

poetry install

Usage

You can choose between these two options: